Seqera for AI agents

Agents read Seqera at once. Changes and sends are held for a person's approval by default.

About Seqera

Seqera Platform is an intuitive, centralized command post that enables data analysis at scale, allowing users to launch, manage, and monitor scalable Nextflow pipelines and compute environments on-premises or across cloud providers.

What an agent can do in Seqera

Every Seqera action is classed by the platform as a read, a change or a send. Reads run at once. Changes and sends are held for a person by default.

Runs at once (reads)

Looks things up in Seqera without asking first. 13 actions.

  • Get Organization DetailsTool to retrieve detailed information about a specific organization.
  • Get Service InfoTool to retrieve information about the Seqera API service. Use when you need to check the service version and commit ID for troubleshooting.
  • Get User InfoTool to retrieve information about the authenticated user. Use when you need to fetch details of the current user after authentication.
  • Get Wave Build LogsTool to get logs for a container build by build ID. Use when you need to troubleshoot or inspect the build process of a Wave container.
  • Get Wave Build StatusTool to retrieve the status of a Wave container build by build ID. Use when you need to check if a container build is completed and whether it succeeded.
  • Inspect Wave ContainerTool to inspect container image metadata via Wave. Use when you need registry, manifest, digest, configuration, and OCI compatibility information about a container image.
  • List Action Event TypesTool to list supported action event types. Use when you need to discover available triggers for pipelines, optionally filtered by workspace.
  • List Compute EnvironmentsTool to retrieve a list of compute environments. Use when you need to page, sort, or filter compute environments accessible to your account.
  • List OrganizationsTool to list all organizations. Use after authentication to retrieve accessible Seqera organizations.
  • List PipelinesTool to list all pipelines accessible to the authenticated user. Use when you need to browse pipelines with optional pagination, sorting, or search filters.
  • List WorkflowsTool to list workflows. Use when you need to retrieve workflows filtered by workspace and paginated.
  • Validate Action NameTool to validate action name. Use when you need to confirm if an action name is valid and available before creating an action. Returns validation status with details.
Show all 13
  • Validate Pipeline NameTool to validate a pipeline name. Use when you need to check if a given pipeline name is valid and available before creating or updating one.

Held for approval by default (changes and sends)

Held for a person's approval by default. The approval is recorded and the action is sent once, never twice, with 10 seconds to undo. 1 action.

  • Create Wave ContainerTool to submit a request to Wave for accessing a private container registry or building a container image on-the-fly. Use when you need to provision containers via Wave with Dockerfile, Conda recipe,

Changes wait in Needs you

Changes and sends in Seqera are held for a person's approval by default. The approval is recorded, and the action is sent once, never twice, with 10 seconds to undo.

How approvals work

Seqera questions

Can an agent change data in Seqera on its own?

Not by default. Changes and sends in Seqera are held for a person's approval. The approval is recorded, and the action is sent once, never twice, with 10 seconds to undo.

What can an agent read in Seqera?

This connector lists 13 read actions. Reads run at once, without waiting for approval.

How does Seqera connect?

It connects with API key. Connectors are built and maintained by third-party developers; availability is confirmed during scoping.

Bring Seqera to your agents.